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Table 3 Results for pairwise/binary classification between sub-populations in each continent

From: Human ancestry indentification under resource constraints -- what can one chromosome tell us about human biogeographical ancestry?

Continent Sub-populations Number of SNPs Correlation Threshold Accuracy (80–20)
America PUR-PEL 56 0.76 100.00%
PUR-MXL 44 0.72 93.33%
PUR-CLM 89 0.83 66.67%
CLM-PEL 96 0.84 97.06%
CLM-MXL 37 0.69 74.07%
PEL-MXL 96 0.84 84.00%
Europe GBR-FIN 15 0.47 78.38%
GBR-IBS 63 0.80 66.67%
GBR-CEU 30 0.64 67.57%
GBR-TSI 24 0.61 76.92%
FIN-IBS 82 0.83 83.33%
FIN-CEU 130 0.88 80.00%
FIN-TSI 75 0.82 90.48%
IBS-CEU 47 0.75 71.43%
IBS-TSI 82 0.83 77.27%
CEU-TSI 31 0.67 73.81%
East Asia CHS-CDX 44 0.73 64.10%
CHS-KHV 12 0.41 68.29%
CHS-CHB 30 0.66 64.29%
CHS-JPT 83 0.84 73.81%
CDX-KHV 30 0.66 68.42%
CDX-CHB 120 0.87 76.92%
CDX-JPT 120 0.87 87.18%
KHV-CHB 62 0.79 75.61%
KHV-JPT 92 0.85 82.93%
CHB-JPT 83 0.84 71.43%
South Asia PJL-BEB 29 0.65 74.29%
PJL-STU 57 0.78 62.50%
PJL-ITU 29 0.65 70.00%
PJL-GIH 153 0.89 100.00%
BEB-STU 42 0.72 72.97%
BEB-ITU 139 0.88 70.27%
BEB-GIH 113 0.86 100.00%
STU-ITU 29 0.65 64.29%
STU-GIH 79 0.82 100.00%
ITU-GIH 79 0.82 100.00%
Africa ACB-GWD 47 0.76 76.74%
ACB-ESN 20 0.56 79.49%
ACB-MSL 46 0.75 71.43%
ACB-YRI 43 0.72 80.49%
ACB-LWK 60 0.79 79.49%
ACB-ASW 15 0.49 81.48%
GWD-ESN 46 0.75 77.27%
GWD-MSL 73 0.82 72.50%
GWD-YRI 132 0.88 100.00%
GWD-LWK 132 0.88 100.00%
GWD-ASW 132 0.88 96.88%
ESN-MSL 102 0.86 69.44%
ESL-YRI 132 0.88 100.00%
ESN-LWK 132 0.88 100.00%
ESN-ASW 132 0.88 96.43%
MSL-YRI 38 0.71 100.00%
MSL-LWK 132 0.88 100.00%
MSL-ASW 73 0.82 91.67%
YRI-LWK 28 0.65 78.57%
YRI-ASW 146 0.89 90.00%
LWK-ASW 162 0.90 85.71%