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Table 1 Variants in the mitochondria associated with drDCM

From: “Omics” data integration and functional analyses link Enoyl-CoA hydratase, short chain 1 to drug refractory dilated cardiomyopathy

Gene_Chr: POS

rs #

AA Change

log2 (fold change)

p-value

q-value

MAF/ MinorAlleleCount

Functional Consequence

ECHS1_chr10: 135186806

rs10466126 GTC  GCC

11 V/A V [Val]  A[Ala]

1.63329

0.00135

0.013927

A = 0.2448 (ExAC), A = 0.3241 (1000 Genomes), A = 0.3952 (GO-ESP)

missense, upstream variant 2 KB

ECHS1: chr10: 135184126

rs1049951 ACC  ATC

75 T/I T [Thr]  I [Ile]

1.63329

0.00135

0.013927

G = 0.0869/10314 (ExAC), G = 0.1787/895 (1000 Genomes), G = 0.1987/2583 (GO-ESP)

missense

DBT chr1:100672060

rs12021720 GGT  AGT

384G/S G [Gly]  S [Ser]

0.955072

0.00545

0.0368792

T = 0.0862/10470 (ExAC), T = 0.1082/542 (1000 Genomes), T = 0.1408/1831 (GO-ESP)

missense

MCCC1 chr3:183037421

rs2270968 CAC  CCC

329H/P H [His]  P [Pro]

1.61882

0.0001

0.00205554

T = 0.3752/45346 (ExAC), G = 0.4649/2328 (1000 Genomes), T = 0.4152/5400 (GO-ESP)

intron variant, missense, nc transcript variant

  1. Legend: ECHS1 enoyl-CoA hydratase, short chain, 1, mitochondrial, DBT Dihydrolipoamide branched chain transacylase E2, and MCCC1 methyl crotonoyl-CoA carboxylase 1. AA Amino acid. P-value probability value. Q-value p-value adjusted for the false discovery rate