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Table 4 Polymorphic tandem repeats in family L061 that were also detected in a control sampling

From: Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

Chr Start End Origin Unit length Copies Purity Unit seq. Annotation L061 (=37SX) family Control unaffected males
SN LJ Proband CJ VHB LT DVS VA RG 6 8 15 17 20 22 26 49 50 60 61 86
chrX 70,151,351 70,151,390 XLID73 2 20 100 GT Upstream 218 227 231 231 231 229 229 229 231 231 227 229 229 221 227 225 223      
chrX 74,743,332 74,743,375 XLID74 2 22 100 AC Upstream 227 231 233 233 227 227 225 229 227 227 227 225 227 227 225 231 227 227 227 225 235 233
chrX 84,343,323 84,343,351 XLID76 1 29 100 T NonCoding 356 361 368 368 361 356 362 360 356 362 362 356 362 356 362 356 356 375 356    
chrX 84,499,126 84,499,197 XLID78 3 24 84.7 CGG FivePrimeUTR 473 463 463 463        463            
chrX 106,184,602 106,184,641 XLID80 2 20 100 GA ThreePrimeUTR 302 300 310 310 298 290 304 294 298 298 304 304 310 304 310 312 302      
  1. Proband – affected family member, SN – unaffected male, LJ – carrier of the disease-related haplotype. Allele size is given in base pairs. Alleles found in the individual with ID are in bold: 231, 233, 368, 463 and 310 for the tandem repeats XLID73, XLID74, XLID76, XLID78 and XLID80 respectively