Skip to main content

Table 3 Performance comparison of different methods on the independent test set

From: Computational identification of deleterious synonymous variants in human genomes using a feature-based approach

Method Recall Precision F-measure (β = 34) AUC
IDSV 0.765 0.098 0.761 0.869
CADD 0.320 0.081 0.319 0.700
FATHMM-MKL 0.712 0.053 0.704 0.751
SilVA 0.490 0.581 0.490 0.844
DDIG-SN 0.298 0.789 0.298 0.854
TraP 0.575 0.518 0.575 0.827
  1. The highest values are highlighted in bold