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Table 4 Pathway analysis for the 41 mRNA biomarkers

From: Identification of long non-coding RNA-related and –coexpressed mRNA biomarkers for hepatocellular carcinoma

Pathway ID

Pathway Name

Molecule

AE

1,430,728

Metabolism

DTYMK;DBH;HADHA;KYNU;SRD5A2

5

109,582

Hemostasis

F11;SOD1;SLC3A2

3

1,640,170

Cell Cycle

CDK4;NUF2;TAOK1

3

69,278

Cell Cycle, Mitotic

CDK4;NUF2;TAOK1

3

74,160

Gene Expression

NR1I2;RPSA;F11

3

162,582

Signal Transduction

HEBP1;SPP1

2

1,643,685

Disease

SPP1;RPSA

2

200,050

Calcineurin-regulated NFAT-dependent transcription in lymphocytes

CDK4;SLC3A2

2

200,170

Nongenotropic Androgen signaling

SHBG;PELP1

2

212,436

Generic Transcription Pathway

NR1I2;F11

2

382,551

Transmembrane transport of small molecules

FLVCR1;SLC3A2

2

453,277

Mitotic M-M/G1 phases

NUF2;TAOK1

2

556,833

Metabolism of lipids and lipoproteins

HADHA;SRD5A2

2

68,877

Mitotic Prometaphase

NUF2;TAOK1

2

68,886

M Phase

NUF2;TAOK1

2

69,306

DNA Replication

NUF2;TAOK1

2

71,291

Metabolism of amino acids and derivatives

DBH;KYNU

2

hsa00380

Tryptophan metabolism

KYNU;HADHA

2

hsa04010

MAPK signaling pathway

MAPKAPK5;TAOK1

2

hsa04142

Lysosome

CTSO;CTSO

2

hsa04510

Focal adhesion

SPP1;MYLK

2

hsa04620

Toll-like receptor signaling pathway

SPP1;CTSO

2