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Table 2 Primer sequences, position, product length and CpG units used for MassArray quantitative methylation analysis

From: DNA methylation status of TBX20 in patients with tetralogy of Fallot

Gene

Forward primer (5ā€²ā€‰ā†’ā€‰3ā€²)a

Reverse primer (5ā€²ā€‰ā†’ā€‰3ā€²)b

Distance

Product

No of CpGā€™s

Coverage

(bp)c

Length (bp)

Ā 

(CpG units)

TBX20_M1

TTTGAGTGTGTATGTTAGTTTGAGTTT

CTCCTATTTTCCCTAAAAAAACCCT

āˆ’945~ā€‰āˆ’ā€‰635

311

23

22

TBX20_M2

GTGAGATTAGGTGGGGATGTTTAT

TCCTTCCTCCCTCTAAAACTAAAAA

āˆ’ā€‰214~167

382

42

32

  1. a10-mer tag: cagtaatacgactcactatagggagaagg
  2. bT7 promoter tag: aggaagagag was added
  3. cRelative to the transcription start site