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Table 2 The overall performance of Multipath2vec, CATAPULT, PRINCE, Deepwalk and Metapath2vec methods on single-gene gene-phenotype data

From: A network embedding model for pathogenic genes prediction by multi-path random walking on heterogeneous network

Algorithm

Multipath2vec

CATAPULT

PRINCE

Deepwalk

Metapath2vec

Top1

266/702

0/702

179/702

242/702

48/702

Top5

532/702

0/702

307/702

491/702

48/702

Top10

606/702

1/702

353/702

538/702

48/702

Top30

651/702

5/702

405/702

596/702

102/702

Top50

662/702

16/702

411/702

618/702

110/702

Top100

678/702

23/702

417/702

644/702

137/702

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BMC Medical Genomics

ISSN: 1755-8794

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