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Table 3 The overall performance of Multipath2vec, CATAPULT, PRINCE, Deepwalk and Metapath2vec methods on many-genes gene-phenotype data

From: A network embedding model for pathogenic genes prediction by multi-path random walking on heterogeneous network

Algorithm

Multipath2vec

CATAPULT

PRINCE

Deepwalk

Metapath2vec

Top1

51/223

46/223

24/223

43/223

48/223

Top5

161/223

57/223

96/223

74/223

73/223

Top10

187/223

62/223

111/223

131/223

73/223

Top30

209/223

65/223

124/223

194/223

152/223

Top50

216/223

67/223

129/223

206/223

168/223

Top100

219/223

67/223

134/223

215/223

185/223

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BMC Medical Genomics

ISSN: 1755-8794

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