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Table 2 SNP rs11170516 is likely to affect protein binding of ESR1 and interact with gene SP1 based on RegulomeDB annotation

From: Genome-wide association study in Chinese cohort identifies one novel hypospadias risk associated locus at 12q13.13

Method

Location

Bound protein/affected gene

Cell type

Additional info

Reference

ChIP-seq

chr12:53752659..53752963

ESR1

ECC-1

estradiol_10nm

ENCODEa

eQTL

chr12:53752691..53752692

SP1

Monocytes

cis

20,502,693

  1. aThe Encyclopedia of DNA Elements [26]