|
Gene name
|
Tumor types altered significantly
|
CpG site
|
Exon
|
Type of AS
|
The direction of the correlation
|
|---|
|
ZNF577
|
HNSC,KIRC,KIRP,LUSC,PRAD
|
cg11269599, cg10635122, cg03562414
|
1.2:1.3
|
RI
|
+
|
| |
KIRC,KIRP,PRAD
|
cg10783469, cg24794228, cg23010048, cg16731240
|
1.2:1.3
|
RI
|
+
|
|
EGFLAM
|
BRAC,HNSC,KIRC,THCA
|
cg21201393
|
1.2:1.3
|
RI
|
+
|
|
ANK3
|
COAD,LUAD,LUSC
|
cg22601415
|
20.1
|
AP
|
–
|
|
DNASE1L1
|
KIRC,KIRP,THCA
|
cg21459545
|
28
|
AP
|
–
|
|
LTB4R2
|
KIRC,LUSC,PRAD
|
cg07164388
|
3.1
|
AP
|
–
|
|
PIK3R1
|
HNSC,LUSC,THCA
|
cg25091228
|
1.2:1.3
|
RI
|
+
|
|
TNFRSF10C
|
HNSC,KIRC,KIRP,PRAD
|
cg14015044
|
9
|
AP
|
–
|
- Abbreviations: BRAC Breast invasive carcinoma, HNSC Head, and neck squamous cell carcinoma, KIRC Kidney renal clear cell carcinoma, KIRP Kidney renal papillary carcinoma, LUAD Lung adenocarcinoma, LUSC Lung squamous cell carcinoma, PRAD Prostate adenocarcinoma, THCA Thyroid carcinoma, AS Alternative splicing, AP Alternate promoter, RI Retained intron, AT Alternate terminator
- “+” represents the positive correlation between PSI values and DNA methylation in the tumor tissues. “-” represents the inverse correlation between PSI values and DNA methylation in the tumor tissues
