From: MetaCNV - a consensus approach to infer accurate copy numbers from low coverage data

Simulation | Depth of coverage | # of amplified genes | # of deleted genes | Total # of genes | Ratio amplified/ deleted genes |
---|---|---|---|---|---|

sim 1x gw1 | 1.1x | 283 | 559 | 13,906 | 0.51 |

sim 1x gw2 | 1.1x | 236 | 573 | 13,920 | 0.41 |

sim 1x lcd | 1.5x | 25 | 30 | 330 | 0.83 |

sim 2x gw1 | 2.2x | 247 | 560 | 13,937 | 0.44 |

sim 2x gw2 | 2.2x | 254 | 588 | 13,922 | 0.43 |

sim 2x lcd | 2.9x | 42 | 44 | 16 | 0.95 |

sim 5x gw1 | 5.7x | 230 | 580 | 13,987 | 0.40 |

sim 5x gw2 | 5.7x | 251 | 593 | 13,949 | 0.42 |

sim 5x lcd | 7.3x | 62 | 48 | 14 | 1.29 |

sim 10x gw1 | 11.3x | 263 | 560 | 13,882 | 0.47 |

sim 10x gw2 | 11.3x | 240 | 551 | 13,865 | 0.44 |

sim 10x lcd | 14.9x | 54 | 49 | 7 | 1.10 |