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Table 1 10× Genomics sequencing summary

From: Haplotyping by linked-read sequencing (HLRS) of the genetic disease carriers for preimplantation genetic testing without a proband or relatives

Sample

G2018004A_LYL

G2018004B_LGB

G2018001A_LSL

Input DNA Molecular Length

21,858 bp

24,088 bp

22,631 bp

Number of Reads

1091.38 M

937.20 M

776.89 M

Mapped Reads

95.9%

94.9%

95.6%

Median Insert Size

365 bp

360 bp

363 bp

Mean Depth

47.4×

40.0×

33.5×

SNPs Phased

99.2%

98.4%

98.9%

Longest Phase Block

5,080,496 bp

5,421,595 bp

3,620,840 bp

N50 Phase Block

775,060 bp

840,402 bp

684,981 bp

  1. SNPs Single nucleotide polymorphisms