Table 3 Several top SNPs and their associated risk for the lung cancer dataset

1

rs9493858

6

134535159

1.9

+

FALSE

SGK1

2

rs11768533

7

27560904

1.56

+

FALSE

-

3

rs3134492

8

96699596

1.54

-

FALSE

C8orf37-AS1

4

rs9893755

17

79187432

1.47

+

FALSE

CEP131

5

rs10266429

7

71932046

1.39

+

FALSE

CALN1

6

rs17168935

7

15672957

1.34

+

FALSE

MEOX2

7

rs17089043

8

23166281

1.34

+

FALSE

LOXL2

8

rs10853701

18

27355474

1.34

+

FALSE

-

9

rs6998594

8

8848993

1.32

+

FALSE

ERI1,LOC105379227

10

rs650434

6

137889729

1.32

+

FALSE

-

11

rs9539394

13

62632653

1.32

+

FALSE

-

12

rs9888682

15

54173596

1.32

+

FALSE

UNC13C

13

rs11774017

8

98227965

1.32

+

FALSE

LOC101927066

14

rs16976057

15

96612108

1.28

+

FALSE

LOC112268156

15

rs1434302

9

28975706

1.25

+

FALSE

LINGO2

16

rs10985284

9

124270502

1.22

+

TRUE

-

17

rs11141468

9

89249433

1.22

+

FALSE

-

18

rs8070093

17

68474421

1.22

+

TRUE

-

19

rs1864466

2

203856457

1.2

+

FALSE

-

20

rs7523787

1

94330615

1.2

+

FALSE

-

21

rs475385

11

117212892

1.2

+

FALSE

CEP164

22

rs13157029

5

86419364

1.2

+

FALSE

LOC101929380

23

rs1409035

13

67839021

1.16

+

FALSE

LOC105370246

24

rs10129678

14

46059875

1.16

+

FALSE

-

25

rs6915318

6

162254299

1.16

+

FALSE

PRKN

26

rs11873590

18

48100355

1.16

+

TRUE

MAPK4

27

rs6761711

2

65128290

1.16

+

FALSE

-

28

rs1944751

9

18224772

1.16

+

FALSE

ADAMTSL1

29

rs10266429

7

71932046

1.16

+

FALSE

CALN1

30

rs12836163

X

90688866

1.15

+

FALSE

PABPC5-AS1

31

rs11078726

17

7900230

1.15

+

FALSE

-

32

rs332635

6

124749725

1.15

+

FALSE

NKAIN2

33

rs4889210

16

80904237

1.1

+

FALSE

LINC02170

34

rs12578154

12

68177559

1.1

+

FALSE

-

35

rs3913648

17

9597295

1.1

+

FALSE

USP43

36

rs284691

19

34231040

1.1

+

TRUE

CHST8

37

rs604277

18

34972537

1.1

+

FALSE

CELF4

38

rs17100016

14

101669396

1.1

+

TRUE

-

39

rs241166

8

28657998

1.1

+

TRUE

INTS9

40

rs2335524

19

7785698

1.05

+

FALSE

-

41

rs7751879

6

133089557

1.05

+

FALSE

-

42

rs7323755

13

45900267

1.05

+

FALSE

-

43

rs17014512

2

34259759

1.04

+

FALSE

LINC01317

44

rs13317243

3

23185162

1.04

+

FALSE

-

45

rs356612

5

63357558

1.04

+

FALSE

-

46

rs7535074

1

202052416

1.04

+

FALSE

-

47

rs9870623

3

145516298

1.04

+

FALSE

-

48

rs3733103

3

45962595

1.04

+

FALSE

FYCO1

49

rs7864264

9

87639472

1.04

+

FALSE

NTRK2

50

rs443565

15

62788601

1.04

+

FALSE

TLN2