Table 7 Performance on different number of somatic program combinations (The data shown are average values)
Cancer types | # of Tools | Total indels | COSMIC indels | Potential germline indels and rate |
|---|---|---|---|---|
Bladder | 1 | 5995 | 4 | 577 (0.24) |
2 | 285 | 1 | 64 (0.22) | |
3 | 92 | 1 | 20 (0.24) | |
4 | 22 | 0 | 6 (0.27) | |
Breast | 1 | 13,963 | 6 | 1463 (0.27) |
2 | 616 | 1 | 185 (0.25) | |
3 | 181 | 1 | 47 (0.19) | |
4 | 36 | 0 | 5 (0.14) | |
Colon | 1 | 15,221 | 13 | 6666 (0.26) |
2 | 3142 | 3 | 948 (0.23) | |
3 | 1051 | 2 | 300 (0.18) | |
4 | 161 | 1 | 14 (0.09) |