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Table 2 Enriched pathway analysis for the mRNAs regulated by selected lncRNAs

From: The cox-filter method identifies respective subtype-specific lncRNA prognostic signatures for two human cancers

 

GO-BP

GO-CC

GO-MF

KEGG

LSCC

–

–

–

–

HSCC

peptide cross-linking, skin development, epidermis development, keratinization, epithelium development, cornification

cornified envelope

  

ESCC

–

nuclear envelope, organelle envelope, organelle, membrane-bounded organelle, intracellular membrane-bounded organelle, organelle part, intracellular organelle part, organelle membrane, intracellular organelle, nuclear part

–

–

EAC

Nephron tubule development

–

–

Nitrogen metabolism

  1. no enriched pathways. LSCC laryngeal squamous cell carcinoma, HSCC hypopharyngeal squamous cell carcinoma, ESCC esophageal squamous cell carcinoma, EAC esophageal adenocarcinoma, GO-BP gene ontology biological process category, GO-CC gene ontology cellular component category, GO-MF gene ontology molecular function category, KEGG Kyoto encyclopedia of genes and genomes pathways
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BMC Medical Genomics

ISSN: 1755-8794

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