Table 7 Results for interactions reported by Liu et al. [2]
From: Modified entropy-based procedure detects gene-gene-interactions in unconventional genetic models
SNP pair | p SNP 1 | Gene 1 | p SNP 2 | Gene 2 | Submodel | LD | TS pair | p value |
|---|---|---|---|---|---|---|---|---|
rs9275595:rs10807113 | 9.50E-63 | DQA2 (F5U) | 1.30E-05 | DQB2 (F3U) | Multi | 0.0026 | 0.03843 | 4.08E-20 |
rs9275390:rs10807113 | 1.22E-56 | DQA2 (F5U) | 1.30E-05 | DQB2 (F3U) | Multi | 0.0001 | 0.039163 | 1.51E-20 |
rs9275390:rs2051549 | 1.22E-56 | DQA2 (F5U) | 4.96E-01 | DQB2 (Intron) | Multi | 0.0074 | 0.029437 | 7.13E-15 |
rs2858332:rs10807113 | 2.90E-06 | DQA2 (F5U) | 1.30E-05 | DQB2 (F3U) | Epi | 0.0082 | 0.043533 | 4.01E-23 |
rs7774434:rs10807113 | 5.09E-19 | DQA1 (F3U) | 1.30E-05 | DQB2 (F3U) | Multi | 0.0035 | 0.029443 | 7.07E-15 |
rs7774434:rs2051549 | 5.09E-19 | DQA1 (F3U) | 4.96E-01 | DQB2 (Intron) | Multi | 0.0011 | 0.042317 | 2.10E-22 |
rs9275390:rs6901084 | 1.22E-56 | DQA2 (F5U) | 1.39E-02 | DQB2 (F5U) | Epi | 0.0088 | 0.025216 | 1.89E-12 |
rs2858332:rs6901084 | 2.90E-06 | DQA2 (F5U) | 1.39E-02 | DQB2 (F5U) | Multi | 0.0091 | 0.043533 | 2.90E-21 |