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Table 1 Measurements on the small test dataset (50,000 records)

From: iDASH secure genome analysis competition 2018: blockchain genomic data access logging, homomorphic encryption on GWAS, and DNA segment searching

Small

Complete

Accurate

Insertion

Query

Disk

Memory

BP

Yes

No

02:36:10

00:00:12

1.570 GB

41 MB

BP2*

Yes

Yes

03:53:50

00:00:02

1.670 GB

42 MB

CSI

Yes

No

00:42:45

00:00:13

1.252 GB

10 MB

Gerstein

Yes

Yes

00:12:30

00:00:28

0.400 GB

18 MB

JUICE

Yes

No

01:03:54

00:02:13

2.300 GB

6 MB

Sandia

Yes

Yes

00:43:09

00:00:26

1.438 GB

22 MB

SUCloud

Yes

No

00:06:28

00:00:15

0.307 GB

15 MB

YCao

Yes

Yes

04:24:20

00:00:08

1.458 GB

26 MB

  1. Complete indicates whether the insertion process is completed within 70 h, and Accurate indicates whether the results of all test queries are accurate. A cell is underscored if the results are not accurate. The bold cells of measurements indicate the best performances among accurate results. The asterisk (*) indicates submissions received shortly after the deadline