Table 1 Results of differentially expressed mRNAs and miRNAs from TCGA, and exosomal miRNAs of GSE39833
From: Bioinformatic analysis reveals an exosomal miRNA-mRNA network in colorectal cancer
Compare | Style | Identification method | Log2FC_Cutoff | padj_Cutoff | All differential expressed Num | Up regulated Num | Down regulated Num | Total Num after merging |
|---|---|---|---|---|---|---|---|---|
Tumor versus normal (TCGA-COADREAD) | mRNA | limma | 1 | 0.05 | 5621 | 2585 | 3036 | 6567 |
edgeR | 1 | 0.05 | 5921 | 2881 | 3040 | |||
Tumor versus normal (TCGA-COADREAD) | miRNA | limma | 1 | 0.05 | 476 | 161 | 315 | 530 |
edgeR | 1 | 0.05 | 502 | 251 | 251 | |||
Tumor versus normal (GSE39833) | Exosomal miRNA | limma | 1 | 0.05 | 79 | 38 | 41 | 165 |
edgeR | 1 | 0.05 | 274 | 244 | 30 |