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Table 4 Pathways that are enriched among target genes of miRNA-3163

From: The expression of miR-513c and miR-3163 was downregulated in tumor tissues compared with normal adjacent tissue of patients with breast cancer

Nos

Gene set

Pathway name

C

E

R

FDR

p valuea

1

hsa05170

Human immunodeficiency virus 1 infection

212

3.6155

3.3191

0.081094

2.5E−04

2

hsa04110

Cell cycle

124

2.1147

3.783

0.09676

1E−03

3

hsa04114

Oocyte meiosis

124

2.1147

3.783

0.09676

1E−03

4

hsa05202

Transcriptional misregulation in cancer

186

3.1721

3.1525

0.09676

1E−03

5

hsa04010

MAPK signaling pathway

295

5.0309

2.584

0.09676

1.5E−03

6

hsa05167

Kaposi sarcoma-associated herpesvirus infection

186

3.1721

2.8373

0.2378

4.4E−03

7

hsa04340

Hedgehog signaling pathway

47

0.80154

4.9904

0.3802

8.2E−03

8

hsa04310

Wnt signaling pathway

146

2.4899

2.8114

0.49589

1E−02

9

hsa05206

MicroRNAs in cancer

150

2.5581

2.7364

0.50585

1.4E−02

10

hsa04218

Cellular senescence

160

2.7286

2.5654

0.58131

2E−02

  1. C the total number of genes in the category, E number of expected genes in each category, R fold enrichment
  2. aThe Benjamini–Hochberg adjusted p value