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Table 2 Functional prediction of the two variants by SpliceAI, dbscSNV_RF, and dbscSNV_ADA algorithms

From: Compound heterozygous variants in DYNC2H1 in a foetus with type III short rib-polydactyly syndrome and situs inversus totalis

HGVS_c

SpliceAI

SpliceAI Pred

SpliceAI Interpretation

dbscSNV_ADA_SCORE

dbscSNV_ADA_pred

dbscSNV_RF_SCORE

dbscSNV_RF_pred

c.2106 + 3A > T

SpliceAI = T|DYNC2H1|0.00|0.00|0.00|0.72|13|-3|-11|-3

D

11:103,004,436 (= 103,004,439–3) donor loss 0.72

0.9994

D

0.93

D

c.11483 T > G

SpliceAI = G|DYNC2H1|0.04|0.00|0.02|0.00|-48|-8|10|-2

P