Table 2 Number of SNPs, genes, gene pairs and top 2% of gene pairs for each mapping and disease map
From: A systematic analysis of gene–gene interaction in multiple sclerosis
Map ID | Physical mapping | eQTL mapping | ||||||
|---|---|---|---|---|---|---|---|---|
#SNPs | #genes | #gene pairs | top 2% | #SNPs | #genes | #gene pairs | top 2% | |
3302 | 416 | 21 | 210 | 4 | 833 | 19 | 171 | 3 |
3305 | 70 | 10 | 45 | 1 | 238 | 8 | 28 | 1 |
3306 | 383 | 21 | 210 | 4 | 869 | 19 | 171 | 3 |
4455 | 755 | 38 | 703 | 14 | 1813 | 36 | 630 | 13 |
4593 | 1295 | 24 | 276 | 6 | 1647 | 17 | 136 | 3 |
4693 | 544 | 34 | 561 | 11 | 912 | 27 | 351 | 7 |
4703 | 331 | 28 | 378 | 8 | 999 | 27 | 351 | 7 |
4791 | 252 | 24 | 276 | 6 | 1264 | 23 | 253 | 5 |
4794 | 84 | 15 | 105 | 2 | 331 | 12 | 66 | 1 |
4843 | 984 | 32 | 496 | 10 | 1401 | 29 | 406 | 8 |
4846 | 1318 | 36 | 630 | 13 | 1555 | 32 | 496 | 10 |
4901 | 1173 | 35 | 595 | 12 | 1209 | 24 | 276 | 6 |
5199 | 656 | 28 | 378 | 8 | 1320 | 32 | 496 | 10 |
5288 | 515 | 27 | 351 | 7 | 724 | 22 | 231 | 5 |
5378 | 257 | 22 | 231 | 5 | 907 | 22 | 231 | 5 |
5398 | 141 | 21 | 210 | 4 | 1050 | 24 | 276 | 6 |
5518 | 392 | 29 | 406 | 8 | 1474 | 27 | 351 | 7 |
5601 | 348 | 28 | 378 | 8 | 742 | 25 | 300 | 6 |
5611 | 224 | 22 | 231 | 5 | 906 | 24 | 276 | 6 |