Skip to main content

Table 2 Some top biological and Reactome pathway between diseases

From: A computational approach for the identification of key genes and biological pathways of chronic lung diseases: a systems biology approach

Asthma-IPF-MLD

Biological Process

P-value

Bonferroni method

Reactome Pathway

P-value

Bonferroni method

 Neutrophil degranulation

1.9E-07

0.00233

Neutrophil degranulation

5.49E-06

0.013788

 Retina homeostasis

1.72E-11

2.11E-07

Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)

6.53E-06

0.016399

 Post-translational protein modification

6.4E-06

0.078357

Post-translational protein phosphorylation

3.16E-06

0.007939

 Cellular protein metabolic process

1.71E-06

0.021

Platelet degranulation

0.000161

0.403806

COPD-Asthma-IPF

Biological Process

P-value

Bonferroni method

Reactome Pathway

P-value

Bonferroni method

 Neutrophil degranulation

3.1E-66

3.79E-62

Neutrophil degranulation

1.52E-50

3.83E-47

 Signal transduction

1.74E-13

2.13E-09

Platelet degranulation

6.24E-41

1.57E-37

 Innate immune response

5.05E-18

6.18E-14

Regulation of insulin-like growth factor (IGF) transport and uptake by insulin-like growth factor binding proteins (IGFBPs)

8.41E-23

2.11E-19

 Cell adhesion

3.25E-18

3.98E-14

Post-translational protein phosphorylation

9.12E-17

2.29E-13

COPD-Asthma-MLD

Biological Process

P-value

Bonferroni method

Reactome Pathway

P-value

Bonferroni method

 Neutrophil degranulation

1.9E-07

0.00233

Neutrophil degranulation

5.49E-06

0.013788

 Post-translational protein modification

6.4E-06

0.078357

Regulation of insulin-like growth factor (IGF) transport and uptake by insulin-like growth factor binding proteins (IGFBPs

6.53E-06

0.016399

 Retina homeostasis

1.72E-11

2.11E-07

HDL remodeling

3.88E-09

9.76E-06

 Cellular protein metabolic process

1.71E-06

0.021

Retinoid metabolism and transport

2.39E-06

0.005999

COPD-IPF-MLD

Biological Process

P-value

Bonferroni method

Reactome Pathway

P-value

Bonferroni method

 Neutrophil degranulation

4.45E-10

5.45E-06

Neutrophil degranulation

4.7E-08

0.000118

 Retina homeostasis

2.11E-16

2.58E-12

Post-translational protein phosphorylation

1.74E-06

0.004372

 Cellular protein metabolic process

3.93E-08

0.000481

Regulation of insulin-like growth factor (IGF) transport, and uptake by insulin-like growth factor binding proteins (IGFBPs)

4.12E-06

0.010344

 Post-translational protein modification

1.13E-05

0.138488

Retinoid metabolism and transport

4.01E-07

0.001007