Table 2 Mean methylation rates and standard deviation of Sanger bisulfite and nanopore sequencing
CpG position | Methylation rate (%) | |||
|---|---|---|---|---|
Bisulfite sequencing (10-plicates) | Nanopore sequencing (12-plicates) | |||
Mean | SD | Mean | SD | |
-734 | 100.0 | 0.0 | 90.0 | 3.8 |
-720 | 85.2 | 9.9 | 91.3 | 4.2 |
-628 | 27.1 | 5.4 | 41.4 | 4.5 |
-480 | 1.6 | 2.7 | 10.0 | 4.6 |
-452 | 25.9 | 14.3 | 26.6 | 6.4 |
-429 | 52.4 | 4.5 | 60.6 | 6.7 |
-412 | 20.1 | 4.0 | 26.9 | 8.3 |