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Table 1 Summary of MPLZ2 variants and related phenotypes

From: MPZL2—a common autosomal recessive deafness gene related to moderate sensorineural hearing loss in the Chinese population

No

Family No. (patient No.)

Nationality

Allele 1

Amino acid change

Allele 2

Amino acid change

Age of onset (years old)

First time

consultancy

Hearing

follow-up

Phenotype

Pathogenicity@

(ACMG criteria)

Age

(years old)

PTA

(dB HL)

Age

(years old)

PTA

(dB HL)

progression

symmetrical

1Δ

 

Dutch [8]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

4

16

50.00

37

61.25

yes

yes

Pathogenic

2

 

Dutch [8]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

9

22

47.50

42

68.75

yes

yes

3

 

Dutch [8]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

4

4

40.00

9

40.00

no

yes

4Δ

 

Turkey [8]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

3

5

37.50

8

42.50

no

yes

5Δ

 

Turkey [8]

c.72delA

(p.Ile24Metfs*22)

c.220C > T

(p.Gln74*)

childhood

34

42.50

44

50.00

yes

yes

Pathogenic/ Pathogenic

6

 

Turkey [8]

c.72delA

(p.Ile24Metfs*22)

c.220C > T

(p.Gln74*)

3

6

37.50

13

36.25

no

yes

Pathogenic/ Pathogenic

7

 

Turkey [8]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

5

5

26.25

16

42.50

yes

yes

Pathogenic

8

 

Turkey [8]

c.72delA

(p.Ile24Metfs*22)

c.220C > T

(p.Gln74*)

6

6

40.00

7

37.50

no

yes

Pathogenic/ Pathogenic

9Δ

 

Turkey [14]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

Congenital or prelingual

/

/

21

R 46.25

L 48.75

no

yes

Pathogenic

10

 

Turkey [14]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

14

R 55.00

L 50.00

no

yes

11

 

Turkey [14]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

8

R 48.75

L 51.25

no

yes

12Δ

 

Turkey [14]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

4

R 53.75

L 50.00

no

yes

13Δ

 

Iran [14]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

Congenital or prelingual

/

/

13

R 42.50

L 40.00

no

yes

Pathogenic

14

 

Iran [14]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

8

R 35.00

L 35.00

no

yes

15

 

Iran [14]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

36

R 66.25

L 66.25

no

yes

16

 

Iran [14]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

5

R 70.00

L 97.50

no

no

17Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.463delG

(p.Ala155Leufs*10)

 < 15

/

/

12.40 ± 4.20#

43.80 ± 8.10#

/

yes

Pathogenic/ Pathogenic

18Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

/

yes

Pathogenic

19Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

/

yes

20Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

/

yes

21Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

/

yes

22Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

/

yes

23Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

/

yes

24Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

/

yes

25Δ

 

Korean [4]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

/

yes

26Δ

 

Moroccan [15]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

prelingual

/

/

childhood

R 49.17

L 33.75

/

yes

Pathogenic

27

 

Moroccan [15]

c.72delA

(p.Ile24Metfs*22)

c.72delA

(p.Ile24Metfs*22)

R 45.83

L 40.00

/

yes

28Δ

 

Chinese [17]

c.220C > T

(p.Gln74*)

c.68delC

(p.Pro23Leufs*2)

13(R)

15

R 57.50

L 28.75

28

R 68.75

L 63.75

yes

no

Pathogenic/ Pathogenic

29Δ

 

Chinese [17]

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

congenital

0.25

R 25.00

L 35.00

1.25

R 40.00

L 45.00

yes

yes

Pathogenic

30Δ

Family 1 (II-1)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

15

15

R 42.25

L 43.25

32

R 60.00

L 61.25

yes

yes

Pathogenic

31

Family 1 (II-3)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

18

18

R 43.75

L 45.50

NA

NA

NA

no

yes

Pathogenic

32Δ

Family 2 (II-1)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.463delG

(p.Ala155Leufs*10)

19

19

R 47.75

L 50.00

20

R 48.75

L 50.00

no

yes

Pathogenic/ Pathogenic

33

Family 2 (II-2)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.463delG

(p.Ala155Leufs*10)

12

12

R 43.75

L 48.75

NA

NA

NA

no

yes

Pathogenic

34Δ

Family 3 (II-1)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.3G > T

(p.Met1?)

childhood

NA

NA

38

R 57.50

L 56.25

yes

yes

Pathogenic/ Likely Pathogenic

35Δ

Family 4 (II-1)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.68delC

(p.Pro23Leufs*2)

20

28

NA

35

R 65.00

L 63.75

yes

yes

Pathogenic/ Pathogenic

36Δ

Family 5 (II-1)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

21

21

NA

23

R 65.00

L 48.75

no

yes

Pathogenic

37Δ

Family 6 (II-1)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

7.5

13

R 43.75

L 38.75

16

R 61.25

L 61.25

yes

yes

Pathogenic

38Δ

Family 7 (II-1)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

10

10

R 42.50

L 43.75

14

R 42.50

L 45.00

no

yes

Pathogenic

39Δ

Family 8 (II-1)

Chinese (this study)

c.220C > T

(p.Gln74*)

c.220C > T

(p.Gln74*)

5

10

NA

10

R 42.50

L 41.25

no

yes

Pathogenic

  1. PTA Pure Tone Average, / data not shown in literature, NA not available, Δ proband, # The data are shown as mean ± SD (Standard Deviation), L left ear, R Right ear, @MPZL2:c.72delA (Pathogenic (PVS1, PP5_very strong, PM2)); MPZL2:c.220C > T (Pathogenic (PVS1, PP5_very strong, PM2)); MPZL2:c.463delG (Pathogenic (PVS1_strong, PP5_moderate, PM2_supporting, PM3)); MPZL2:c.68delC (Pathogenic (PVS1, PP5_moderate, PM2_supporting)); MPZL2:c.3C > T (Likely Pathogenic (PVS1_Moderate, PM2, PM3))
  2. *Denotes gene truncation mutations, serving as a universal approach for denoting such mutations in written form, rather than relying on specific legends or notations