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Table 1 Information on thalassemia families and established cell lines

From: Development of preimplantation genetic testing for monogenic reference materials using next-generation sequencing

Families

Relationship

Genotypes

HGVS nomenclature

Clinical severity

Cell line no.

Package

Sample type

Family 1

Husband 1

–α3.7/αα, Codons 41/42(-TTCT)/βN

NG_000006.1: g.34164_37967del, HBB: c.126_129delCTTT

Thalassemia trait

CNGB030011

20 ng/µL,

15 µL/tube

gDNA

Wife 1

Gγ(Aγδβ)0N

NG_000007.3: g.48795_127698del

Thalassemia trait

CNGB030012

20 ng/µL,

15 µL/tube

gDNA

Offspring 1–1 (Proband)

Codons 41/42(-TTCT)/Gγ(Aγδβ)0

HBB: c.126_129delCTTT, NG_000007.3: g.48795_127698del

Thalassemia major

CNGB030014

20 ng/µL,

15 µL/tube

gDNA

Offspring 1–2

(Simulated embryo)

–α3.7/αα, Gγ(Aγδβ)0N

NG_000006.1: g.34164_37967del, NG_000007.3: g.48795_127698del

Thalassemia trait

CNGB030013

3–5 cells/tube

Cells

Family 2

Husband 2

--SEA/αα

NG_000006.1: g.26264_45564del

Thalassemia trait

CNGB030015

20 ng/µL,

15 µL/tube

gDNA

Wife 2

αCSα/αα

HBA2: c.427T > C

Thalassemia trait

CNGB030016

20 ng/µL,

15 µL/tube

gDNA

Offspring 2 − 1 (Proband)

--SEACSα

NG_000006.1: g.26264_45564del, HBA2: c.427T > C

Thalassemia intermedia

CNGB030018

20 ng/µL,

15 µL/tube

gDNA

Offspring 2–2

(Simulated embryo)

αCSα/αα

HBA2: c.427T > C

Thalassemia trait

CNGB030017

3–5 cells/tube

Cells

Family 3

Husband 3

Gγ(Aγδβ)0N

NG_000007.3: g.48795_127698del

Thalassemia trait

CNGB030019

20 ng/µL,

15 µL/tube

gDNA

Wife 3

Codons 41/42(-TTCT)/βN

HBB: c.126_129delCTTT

Thalassemia trait

CNGB030020

20 ng/µL,

15 µL/tube

gDNA

Offspring 3 − 1 (Proband)

Codons 41/42(-TTCT)/Gγ(Aγδβ)0

HBB: c.126_129delCTTT, NG_000007.3: g.48795_127698del

Thalassemia major

CNGB030328

20 ng/µL,

15 µL/tube

gDNA

Offspring 3 − 2

(Simulated embryo)

Gγ(Aγδβ)0N

NG_000007.3: g.48795_127698del

Thalassemia trait

CNGB030021

3–5 cells/tube

Cells

Family 4

Husband 4

IVS-II-654 (C > T)/βN

HBB: c.316-197 C > T

Thalassemia trait

CNGB030008

20 ng/µL,

15 µL/tube

gDNA

Wife 4

--SEA/αα, IVS-II-654 (C > T)/βN

NG_000006.1: g.26264_45564del, HBB: c.316-197 C > T

Thalassemia trait

CNGB030009

20 ng/µL,

15 µL/tube

gDNA

Offspring 4 − 1 (Proband)

--SEA/αα,

IVS-II-654 (C > T)/IVS-II-654 (C > T)

NG_000006.1: g.26264_45564del, HBB: c.316-197 C > T

Thalassemia intermedia

CNGB030004

20 ng/µL,

15 µL/tube

gDNA

Offspring 4 − 2

(Simulated embryo)

IVS-II-654 (C > T)/βN

HBB: c.316-197 C > T

Thalassemia trait

CNGB030010

3–5 cells/tube

Cells