Table 1 Prediction results of some lncRNA target genes
miRNA name | gene name | ClipExp Num | miRseq | align | targetSeq |
|---|---|---|---|---|---|
hsa-miR-520a-5p | PCBP1-AS1 | 1 | ucuuucaugaaggGAGACCUc | ||||||| | ggaaccucagugaCUCUGGAu |
hsa-miR-525-5p | PCBP1-AS1 | 1 | ucUUUCACGUAGGGAGACCUc | || |:| ||||||| | ggAACCUCAGUGACUCUGGAu |
hsa-miR-3186-3p | AC100861.1 | 1 | guUUCG-GUAGAGAGGCGCACu | || | |: | | ||||||| | ucAACCACGGC-CGCCGCGUGg |
hsa-miR-873-5p | AC100861.1 | 3 | uccucugaguGUUCAAGGACg | | |||||||| | uuucugugacCCAGUUCCUGg |
hsa-miR-1245b-5 | TEX41 | 1 | aaAUUCACUAGAU-UUCCGGAu | ||| ||: ||: ||||||| | ugUAA-UGGCCUGCAAGGCCUu |
hsa-miR-885-5p | TEX41 | 1 | ucuccgucccaucACAUUACCu | |||||||| | acaccaacauuuuUGUAAUGGc |
hsa-miR-3142 | TEX41 | 1 | agAC-UUCCAAGUCUUUCCGGAa | || || | | | ||||||| | uuUGUAAUGGCCUGCAAGGCCUu |
hsa-miR-216b-5p | AL355076.2 | 1 | aguguaaaCGGACGUCUCUAAa | |:| |||||||| | uggaguaaGUCCACAGAGAUUc |
hsa-miR-136-5p | AL355076.2 | 1 | aggUAGUAGUUUU–-GUUUACCUCa | :|||| ||:::||||||| | ggaGUCAUAAAUGUUCUGAAUGGAGu |