Table 3 E. coli pathotypes virulence genes (N = 138)
Pathotypes | Virulence gene | Prevalence, n (%) |
|---|---|---|
Diarrheagenic E. coli (DEC) | Â | Â |
EAEC | aggR | 3 (2.2) |
aatA | 3 (2.2) | |
agg3A | 3 (2.2) | |
hlyE | 71 (51.4) | |
DAEC | afaA/E | 37 (26.8) |
EIEC | ipaH | 1 (0.7) |
EPEC | espA | 1 (0.7) |
eae | 1 (0.7) | |
EHEC | Stx1, stx2 | 0 (0.0) |
Extraintestinal E. coli (ExPEC) | Â | Â |
UPEC | fyuA | 114 (82.6) |
chuA | 95 (68.8) | |
yfcV | 80 (58.0) | |
vat | 16 (11.6) | |
papC | 46 (33.3) | |
sfa | 5 (3.6) | |
cnf | 24 (17.4) | |
NMEC | irp | 113 (81.9) |
neuC | 16 (11.6) |