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Table 5 E. coli pathotypes with drug resistance

From: Short reads-based characterization of pathotype diversity and drug resistance among Escherichia coli isolated from patients attending regional referral hospitals in Tanzania

PATHOTYPES (n)

CRO

TRM

GEN

AMP

CIP

AMC

TET

CHL

CAZ

MEM

NA

EAEC (n= 21)

4 (19.0%)

13 (61.9%)

3 (14.3%)

12 (57.1%)

10 (47.6%)

4 (19.0%)

16 (76.2%)

3 (14.3%)

4 (19.0%)

0 (0.0%)

6 (28.6%)

EPEC/EAEC (n= 1)

1 (100%)

1 (100%)

0 (0.0%)

1 (100%)

1 (100%)

0 (0.0%)

1 (100%)

1 (100%)

1 (100%)

0 (0.0%)

1 (100%)

NMEC/UPEC (n= 41)

16 (39.0%)

37 (90.2%)

21 (51.2%)

39 (95.1%)

37 (90.2%)

6 (14.6%)

36 (87.8%)

1 (2.4%)

16 (39.0%)

1 (2.4%)

37 (90.2%)

NMEC/UPEC/DAEC (n= 25)

18 (72.0%)

23 (92.0%)

16 (64.0%)

25 (100%)

20 (80.0%)

14 (56.0%)

19 (76.0%)

1 (4.0%)

18 (72.0%)

0 (0.0%)

20 (80.0%)

NMEC/UPEC/EAEC (n= 36)

17 (47.2%)

30 (83.3%)

6 (16.7%)

34 (94.4%)

27 (75.0%)

8 (22.2%)

30 (83.3%)

10 (27.8%)

17 (47.2%)

1 (2.8%)

26 (72.2%)

NMEC/UPEC/EAEC/DAEC (n= 11)

9 (81.8%)

11 (100%)

6 (54.5%)

11 (100%)

9 (81.8%)

9 (81.8%)

6 (54.5%)

0 (0.0%)

9 (81.8%)

0 (0.0%)

9 (81.8%)

NMEC/UPEC/EAEC/EIEC (n= 1)

1 (100%)

1 (100%)

0 (0.0%)

1 (100%)

1 (100%)

0 (0.0%)

1 (100%)

0 (0.0%)

1 (100%)

0 (0.0%)

1 (100%)

UPEC (n=1)

1 (100%)

1 (100%)

0 (0.0%)

1 (100%)

0 (0.0%)

0 (0.0%)

0 (0.0%)

1 (100%)

1 (100%)

0 (0.0%)

0 (0.0%)

UPEC/EAEC/DAEC (n= 1)

1 (100%)

1 (100%)

0 (0.0%)

1 (100%)

0 (0.0%)

0 (0.0%)

1 (100%)

1 (100%)

1 (100%)

0 (0.0%)

0 (0.0%)

Total

68 (48.9%)

119 (85.6%)

52 (37.4%)

126 (90.6)

105 (75.5%)

41 (29.5%)

110(79.1%)

18 (12.9%)

68 (48.9%)

2 (1.4%)

100 (71.9%)

  1. CHL- Chloramphenicol, MEM- Meropenem, CIP- Ciprofloxacin, AMC- Amoxicillin-clavunated, AMP- Ampicillin, CAZ- Ceftazidime, TMP-Trimethoprim, CRO- Ceftriaxone, GEN- Gentamicin, NAL- Nalidixic acid