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Fig. 4 | BMC Medical Genomics

Fig. 4

From: Identification and ranking of recurrent neo-epitopes in cancer

Fig. 4

Recognition of predicted epitopes by CD8 + T cells. Epitopes for recurrent mutations that have been identified in silico to bind to HLA-A*02:01 using our pipeline were synthesized and used for immunization of human TCR transgenic ABabDII mice. Examples (RAC1:P29S and TRRAP:S722F) of ex vivo ICS analysis of mutant peptide immunized ABabDII mice 7 days after the last immunization are shown. Polyclonal stimulation with CD3/CD28 dynabeads was used as positive control, stimulation with an irrelevant peptide served as negative control (data not shown)

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