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  1. Studies in mothers of Down syndrome individuals (MDS) point to a role for polymorphisms in folate metabolic genes in increasing chromosome damage and maternal risk for a Down syndrome (DS) pregnancy, suggestin...

    Authors: Fabio Coppedè, Enzo Grossi, Francesca Migheli and Lucia Migliore
    Citation: BMC Medical Genomics 2010 3:42
  2. Decubitus ulcers, also known as bedsores or pressure ulcers, affect millions of hospitalized patients each year. The microflora of chronic wounds such as ulcers most commonly exist in the biofilm phenotype and...

    Authors: Drake M Smith, David E Snow, Eric Rees, Ann M Zischkau, J Delton Hanson, Randall D Wolcott, Yan Sun, Jennifer White, Shashi Kumar and Scot E Dowd
    Citation: BMC Medical Genomics 2010 3:41
  3. Pathological angiogenesis represents a critical issue in the progression of many diseases. Down syndrome is postulated to be a systemic anti-angiogenesis disease model, possibly due to increased expression of ...

    Authors: Valerio Costa, Linda Sommese, Amelia Casamassimi, Roberta Colicchio, Claudia Angelini, Valentina Marchesano, Lara Milone, Bartolomeo Farzati, Alfonso Giovane, Carmela Fiorito, Monica Rienzo, Marco Picardi, Bice Avallone, Massimiliano Marco Corsi, Berardo Sarubbi, Raffaele Calabrò…
    Citation: BMC Medical Genomics 2010 3:40
  4. Tumor therapy mainly attacks the metabolism to interfere the tumor's anabolism and signaling of proliferative second messengers. However, the metabolic demands of different cancers are very heterogeneous and d...

    Authors: Gunnar Schramm, Eva-Maria Surmann, Stefan Wiesberg, Marcus Oswald, Gerhard Reinelt, Roland Eils and Rainer König
    Citation: BMC Medical Genomics 2010 3:39
  5. According to the Genetic Analysis Workshops (GAW), hundreds of thousands of SNPs have been tested for association with rheumatoid arthritis. Traditional genome-wide association studies (GWAS) have been develop...

    Authors: Liangcai Zhang, Wan Li, Leilei Song and Lina Chen
    Citation: BMC Medical Genomics 2010 3:38
  6. Drinking water contaminated with inorganic arsenic is associated with increased risk for different types of cancer. Paradoxically, arsenic trioxide can also be used to induce remission in patients with acute p...

    Authors: Qian Liu, Hao Zhang, Lisa Smeester, Fei Zou, Matt Kesic, Ilona Jaspers, Jingbo Pi and Rebecca C Fry
    Citation: BMC Medical Genomics 2010 3:37
  7. Gene expression profiling is a highly sensitive technique which is used for profiling tumor samples for medical prognosis. RNA quality and degradation influence the analysis results of gene expression profiles...

    Authors: Lennart Opitz, Gabriela Salinas-Riester, Marian Grade, Klaus Jung, Peter Jo, Georg Emons, B Michael Ghadimi, Tim Beißbarth and Jochen Gaedcke
    Citation: BMC Medical Genomics 2010 3:36
  8. Excessive accumulation of body fat, in particular in the visceral fat depot, is a major risk factor to develop a variety of diseases such as type 2 diabetes. The mechanisms underlying the increased risk of obe...

    Authors: Marcel GM Wolfs, Sander S Rensen, Elinda J Bruin-Van Dijk, Froukje J Verdam, Jan-Willem Greve, Bahram Sanjabi, Marcel Bruinenberg, Cisca Wijmenga, Timon W van Haeften, Wim A Buurman, Lude Franke and Marten H Hofker
    Citation: BMC Medical Genomics 2010 3:34
  9. Diabetic nephropathy is a serious complication of diabetes mellitus and is associated with considerable morbidity and high mortality. There is increasing evidence to suggest that dysregulation of the epigenome...

    Authors: Christopher G Bell, Andrew E Teschendorff, Vardhman K Rakyan, Alexander P Maxwell, Stephan Beck and David A Savage
    Citation: BMC Medical Genomics 2010 3:33
  10. An important consideration when analyzing both microarray and quantitative PCR expression data is the selection of appropriate genes as endogenous controls or reference genes. This step is especially critical ...

    Authors: Raj Chari, Kim M Lonergan, Larissa A Pikor, Bradley P Coe, Chang Qi Zhu, Timothy HW Chan, Calum E MacAulay, Ming-Sound Tsao, Stephen Lam, Raymond T Ng and Wan L Lam
    Citation: BMC Medical Genomics 2010 3:32
  11. The existence of a radiation bystander effect, in which non-irradiated cells respond to signals from irradiated cells, is well established. To understand early signaling and gene regulation in bystander cells,...

    Authors: Shanaz A Ghandhi, Lihua Ming, Vladimir N Ivanov, Tom K Hei and Sally A Amundson
    Citation: BMC Medical Genomics 2010 3:31
  12. Myelodysplastic syndromes (MDS) are a group of clonal hematological disorders characterized by ineffective hematopoiesis with morphological evidence of marrow cell dysplasia resulting in peripheral blood cytop...

    Authors: Mariana O Baratti, Yuri B Moreira, Fabiola Traina, Fernando F Costa, Sergio Verjovski-Almeida and Sara T Olalla-Saad
    Citation: BMC Medical Genomics 2010 3:30
  13. This investigation offers insights into system-wide pathological processes induced in response to cigarette smoke exposure by determining its influences at the gene expression level.

    Authors: Jac C Charlesworth, Joanne E Curran, Matthew P Johnson, Harald HH Göring, Thomas D Dyer, Vincent P Diego, Jack W Kent Jr, Michael C Mahaney, Laura Almasy, Jean W MacCluer, Eric K Moses and John Blangero
    Citation: BMC Medical Genomics 2010 3:29
  14. ATRX is a severe X-linked disorder characterized by mental retardation, facial dysmorphism, urogenital abnormalities and alpha-thalassemia. The disease is caused by mutations in ATRX gene, which encodes a prot...

    Authors: Vincenza Barresi, Angela Ragusa, Marco Fichera, Nicolò Musso, Lucia Castiglia, Giancarlo Rappazzo, Salvatore Travali, Teresa Mattina, Corrado Romano, Guido Cocchi and Daniele F Condorelli
    Citation: BMC Medical Genomics 2010 3:28
  15. Cerebral ischemia/reperfusion injury is a common secondary effect of cardiac arrest which is largely responsible for postresuscitative mortality. Therefore development of therapies which restore and protect th...

    Authors: Cécile Martijn and Lars Wiklund
    Citation: BMC Medical Genomics 2010 3:27
  16. Hyperactivation of the Ras signaling pathway is a driver of many cancers, and RAS pathway activation can predict response to targeted therapies. Therefore, optimal methods for measuring Ras pathway activation ...

    Authors: Andrey Loboda, Michael Nebozhyn, Rich Klinghoffer, Jason Frazier, Michael Chastain, William Arthur, Brian Roberts, Theresa Zhang, Melissa Chenard, Brian Haines, Jannik Andersen, Kumiko Nagashima, Cloud Paweletz, Bethany Lynch, Igor Feldman, Hongyue Dai…
    Citation: BMC Medical Genomics 2010 3:26
  17. Cancer is a heterogeneous disease caused by genomic aberrations and characterized by significant variability in clinical outcomes and response to therapies. Several subtypes of common cancers have been identif...

    Authors: Xin Lu, Ke Zhang, Charles Van Sant, John Coon and Dimitri Semizarov
    Citation: BMC Medical Genomics 2010 3:23
  18. The inability of aspirin (ASA) to adequately suppress platelet aggregation is associated with future risk of coronary artery disease (CAD). Heritability studies of agonist-induced platelet function phenotypes ...

    Authors: Rasika A Mathias, Yoonhee Kim, Heejong Sung, Lisa R Yanek, VJ Mantese, J Enrique Hererra-Galeano, Ingo Ruczinski, Alexander F Wilson, Nauder Faraday, Lewis C Becker and Diane M Becker
    Citation: BMC Medical Genomics 2010 3:22
  19. In translational cancer research, gene expression data is collected together with clinical data and genomic data arising from other chip based high throughput technologies. Software tools for the joint analysi...

    Authors: Alexander Gribov, Martin Sill, Sonja Lück, Frank Rücker, Konstanze Döhner, Lars Bullinger, Axel Benner and Antony Unwin
    Citation: BMC Medical Genomics 2010 3:21
  20. Development in systems biology research has accelerated in recent years, and the reconstructions for molecular networks can provide a global view to enable in-depth investigation on numerous system properties ...

    Authors: Shih-Kuang Yang, Yu-Chao Wang, Chun-Cheih Chao, Yung-Jen Chuang, Chung-Yu Lan and Bor-Sen Chen
    Citation: BMC Medical Genomics 2010 3:19
  21. The term endothelial progenitor cells (EPCs) is currently used to refer to cell populations which are quite dissimilar in terms of biological properties. This study provides a detailed molecular fingerprint fo...

    Authors: Reinhold J Medina, Christina L O'Neill, Mark Sweeney, Jasenka Guduric-Fuchs, Tom A Gardiner, David A Simpson and Alan W Stitt
    Citation: BMC Medical Genomics 2010 3:18
  22. MUC1 protein is highly expressed in lung cancer. The cytoplasmic domain of MUC1 (MUC1-CD) induces tumorigenesis and resistance to DNA-damaging agents. We characterized MUC1-CD-induced transcriptional changes a...

    Authors: Dhara M MacDermed, Nikolai N Khodarev, Sean P Pitroda, Darrin C Edwards, Charles A Pelizzari, Lei Huang, Donald W Kufe and Ralph R Weichselbaum
    Citation: BMC Medical Genomics 2010 3:16
  23. Chronic inflammatory diseases including inflammatory bowel disease (IBD; Crohn's disease and ulcerative colitis), psoriasis and rheumatoid arthritis (RA) afflict millions of people worldwide, but their pathoge...

    Authors: Bertalan Mesko, Szilard Poliskal, Andrea Szegedi, Zoltan Szekanecz, Karoly Palatka, Maria Papp and Laszlo Nagy
    Citation: BMC Medical Genomics 2010 3:15
  24. The development and progression of cancer depend on its genetic characteristics as well as on the interactions with its microenvironment. Understanding these interactions may contribute to diagnostic and progn...

    Authors: Flávia C Rodrigues-Lisoni, Paulo Peitl Jr, Alessandra Vidotto, Giovana M Polachini, José V Maniglia, Juliana Carmona-Raphe, Bianca R Cunha, Tiago Henrique, Caique F Souza, Rodrigo AP Teixeira, Erica E Fukuyama, Pedro Michaluart Jr, Marcos B de Carvalho, Sonia M Oliani and Eloiza H Tajara
    Citation: BMC Medical Genomics 2010 3:14
  25. Trisomic variants of human embryonic stem cells (hESCs) arise spontaneously in culture. Although trisomic hESCs share many properties with diploid hESCs, they also exhibit features of cancer stem cells. Since ...

    Authors: Sailesh Gopalakrishna-Pillai and Linda E Iverson
    Citation: BMC Medical Genomics 2010 3:12
  26. Genomic copy number alterations are widely associated with a broad range of human tumors and offer the potential to be used as a diagnostic tool. Especially in the emerging era of personalized medicine medical...

    Authors: Yuri Kotliarov, Serdar Bozdag, Hangjiong Cheng, Stefan Wuchty, Jean-Claude Zenklusen and Howard A Fine
    Citation: BMC Medical Genomics 2010 3:11
  27. One consistent finding in autism spectrum disorders (ASD) is a decreased level of the pineal gland hormone melatonin and it has recently been demonstrated that this decrease to a large extent is due to low act...

    Authors: Lina Jonsson, Elin Ljunggren, Anna Bremer, Christin Pedersen, Mikael Landén, Kent Thuresson, MaiBritt Giacobini and Jonas Melke
    Citation: BMC Medical Genomics 2010 3:10
  28. Increased mammographic density is one of the strongest independent risk factors for breast cancer. It is believed that one third of breast cancers are derived from breasts with more than 50% density. Mammograp...

    Authors: Margarethe Biong, Inger T Gram, Ilene Brill, Fredrik Johansen, Hiroko K Solvang, Grethe IG Alnaes, Toril Fagerheim, Yngve Bremnes, Stephen J Chanock, Laurie Burdett, Meredith Yeager, Giske Ursin and Vessela N Kristensen
    Citation: BMC Medical Genomics 2010 3:9
  29. Current prostate cancer prognostic models are based on pre-treatment prostate specific antigen (PSA) levels, biopsy Gleason score, and clinical staging but in practice are inadequate to accurately predict dise...

    Authors: Andrea Sboner, Francesca Demichelis, Stefano Calza, Yudi Pawitan, Sunita R Setlur, Yujin Hoshida, Sven Perner, Hans-Olov Adami, Katja Fall, Lorelei A Mucci, Philip W Kantoff, Meir Stampfer, Swen-Olof Andersson, Eberhard Varenhorst, Jan-Erik Johansson, Mark B Gerstein…
    Citation: BMC Medical Genomics 2010 3:8
  30. Public proteomics databases such as PeptideAtlas contain peptides and proteins identified in mass spectrometry experiments. However, these databases lack information about human disease for researchers studyin...

    Authors: Jeremy Handcock, Eric W Deutsch and John Boyle
    Citation: BMC Medical Genomics 2010 3:7
  31. Childhood leukemia is characterized by the presence of balanced chromosomal translocations or by other structural or numerical chromosomal changes. It is well know that leukemias with specific molecular abnorm...

    Authors: Anna Andersson, Patrik Edén, Tor Olofsson and Thoas Fioretos
    Citation: BMC Medical Genomics 2010 3:6
  32. Chronic systemic low-grade inflammation in obese subjects is associated with health complications including cardiovascular diseases, insulin resistance and diabetes. Reducing inflammatory responses may reduce ...

    Authors: Marjan J van Erk, Suzan Wopereis, Carina Rubingh, Trinette van Vliet, Elwin Verheij, Nicole HP Cnubben, Theresa L Pedersen, John W Newman, Age K Smilde, Jan van der Greef, Henk FJ Hendriks and Ben van Ommen
    Citation: BMC Medical Genomics 2010 3:5
  33. Abberant DNA methylation at CpG dinucleotides represents a common mechanism of transcriptional silencing in cancer. Since CpG methylation is a reversible event, tumor supressor genes that have undergone silenc...

    Authors: Jill C Rubinstein, Nam Tran, Shuangge Ma, Ruth Halaban and Michael Krauthammer
    Citation: BMC Medical Genomics 2010 3:4
  34. Prevalence of obesity is increasing to pandemic proportions. However, obese subjects differ in insulin resistance, adipokine production and co-morbidities. Based on fasting plasma analysis, obese subjects were...

    Authors: Robin E MacLaren, Wei Cui, HuiLing Lu, Serge Simard and Katherine Cianflone
    Citation: BMC Medical Genomics 2010 3:3
  35. Acute erythro- and megakaryoblastic leukaemias are associated with very poor prognoses and the mechanism of blastic transformation is insufficiently elucidated. The murine Graffi leukaemia retrovirus induces e...

    Authors: Veronique Voisin, Philippe Legault, Diana Paulina Salazar Ospina, Yaacov Ben-David and Eric Rassart
    Citation: BMC Medical Genomics 2010 3:2
  36. The genetic contributions to human common disorders and mouse genetic models of disease are complex and often overlapping. In common human diseases, unlike classical Mendelian disorders, genetic factors genera...

    Authors: Yonqing Zhang, Supriyo De, John R Garner, Kirstin Smith, S Alex Wang and Kevin G Becker
    Citation: BMC Medical Genomics 2010 3:1
  37. Genome-wide association studies (GWAS) have emerged as a powerful approach for identifying susceptibility loci associated with polygenetic diseases such as type 2 diabetes mellitus (T2DM). However, it is still...

    Authors: Hemang Parikh, Valeriya Lyssenko and Leif C Groop
    Citation: BMC Medical Genomics 2009 2:72
  38. Accumulating evidence suggests that somatic stem cells undergo mutagenic transformation into cancer initiating cells. The serous subtype of ovarian adenocarcinoma in humans has been hypothesized to arise from ...

    Authors: Nathan J Bowen, L DeEtte Walker, Lilya V Matyunina, Sanjay Logani, Kimberly A Totten, Benedict B Benigno and John F McDonald
    Citation: BMC Medical Genomics 2009 2:71
  39. Prostate cancer is a world wide leading cancer and it is characterized by its aggressive metastasis. According to the clinical heterogeneity, prostate cancer displays different stages and grades related to the...

    Authors: Hsiang-Yuan Yeh, Shih-Wu Cheng, Yu-Chun Lin, Cheng-Yu Yeh, Shih-Fang Lin and Von-Wun Soo
    Citation: BMC Medical Genomics 2009 2:70
  40. Microarray technology has allowed to molecularly characterize many different cancer sites. This technology has the potential to individualize therapy and to discover new drug targets. However, due to technolog...

    Authors: Olivier Gevaert, Anneleen Daemen, Bart De Moor and Louis Libbrecht
    Citation: BMC Medical Genomics 2009 2:69
  41. Mastic oil from Pistacia lentiscus variation chia, a blend of bioactive terpenes with recognized medicinal properties, has been recently shown to exert anti-tumor growth activity through inhibition of cancer cell...

    Authors: Panagiotis Moulos, Olga Papadodima, Aristotelis Chatziioannou, Heleni Loutrari, Charis Roussos and Fragiskos N Kolisis
    Citation: BMC Medical Genomics 2009 2:68
  42. Despite the significant progress made in colon cancer chemotherapy, advanced disease remains largely incurable and novel efficacious chemotherapies are urgently needed. Histone deacetylase inhibitors (HDACi) r...

    Authors: Melissa J LaBonte, Peter M Wilson, William Fazzone, Susan Groshen, Heinz-Josef Lenz and Robert D Ladner
    Citation: BMC Medical Genomics 2009 2:67
  43. In molecular profiling studies of cancer patients, experimental and clinical data are combined in order to understand the clinical heterogeneity of the disease: clinical information for each subject needs to b...

    Authors: Irene Papatheodorou, Charles Crichton, Lorna Morris, Peter Maccallum, Jim Davies, James D Brenton and Carlos Caldas
    Citation: BMC Medical Genomics 2009 2:66

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