Obstructive sleep apnea and atrial fibrillation: insights from a bidirectional Mendelian randomization study
BMC Medical Genomics volume 15, Article number: 28 (2022)
Observational studies have suggested that obstructive sleep apnea (OSA) is in relation to atrial fibrillation (AF); however, these studies might be confounded and whether the relationship is causal remains unclear. We conducted a bidirectional Mendelian randomization (MR) study to clarify the causal inference between OSA and AF.
Genetic instruments for OSA and AF were obtained from genome-wide association studies. The fixed-effects inverse-variance weighted (IVW) method was used as the main method, supplemented by several sensitivity analyses. For replication, another AF dataset was used to validate the causal effect of OSA on AF. Furthermore, multivariable MR analyses were performed to obtain direct estimates adjusting for potential confounders.
Genetic liability to OSA was found to be significantly associated with a higher AF risk in the fixed-effects IVW method [odds ratio (OR) 1.210; 95% CI 1.119–1.307; P = 1.51 × 10–6]. The results were consistent in MR sensitivity analyses as well as in replication analyses, and the significance remained after adjusting for potential confounders. In the reverse MR analyses, there was no causal effect of AF on OSA.
Our study strengthened the causal evidence of genetically predicted OSA with a higher AF risk. Early screening and appropriate management of OSA might show anti-arrhythmic benefits.
Atrial fibrillation (AF), the most prevalent sustained cardiac arrhythmia worldwide, affects 2% to 4% of the adult population . Due to an aging population and increased prevalence of risk factors, AF is associated with high morbidity and mortality, and increasingly contributes to a significant burden to patients, physicians, and healthcare systems globally .
Obstructive sleep apnea (OSA), characterized by the repetitive partial or complete collapse of the upper airway during sleep , is the most common type of sleep-disordered breathing and is highly prevalent. Previous studies suggested that OSA and AF were closely interconnected. The prevalence of OSA was higher in patients with AF compared with the general population ; conversely, the prevalence of AF in patients with sleep apnea was much higher than control participants . Recent data showed that OSA is a potential risk factor of AF , and could exert a negative impact on the efficacy of catheter ablation and pharmacological antiarrhythmic therapy [7, 8]. In addition, OSA and AF share many risk factors and comorbidities, such as increasing age, male gender, obesity, hypertension, heart failure, and coronary artery disease [9, 10], making observational studies possibly biased. Considering the confounding factors and reverse causation inevitable in observational studies, the causality between OSA and AF remains unclear and warrants further investigation.
Mendelian randomization (MR) study, utilizing genetic variants as instrumental variables (IVs) to analyze the causal inference between exposures and outcomes, is less vulnerable to residual confounding . Therefore, we conducted a two-sample bidirectional and multivariable MR study to estimate the causal inference between OSA and AF.
Material and methods
A two-sample bidirectional MR approach was used to estimate the causal inference between OSA and AF. MR approach builds upon three important assumptions: (1) the IVs are strongly associated with the exposure, (2) the IVs are independent of any confounders, and (3) the IVs affect the outcome only through the exposure but not via other pathways (Fig. 1).
Data sources and IVs selection
Detailed information on the data sources were shown in Table 1. Summary-level data of OSA were retrieved from a recent genome-wide association study (GWAS) published by Strausz et al., containing 16,761 OSA patients and 201,194 cases in the FinnGen Study . Cases of OSA were defined based on the International Classification of Diseases (ICD) codes (ICD-10: G47.3, ICD-9: 3472A) . 5 distinct genetic loci genome-wide significantly associated with OSA (P < 5 × 10–8) were identified . We implemented the latest GWAS meta-analysis for AF conducted by Nielsen et al. involving six contributing studies, including the Nord-Trøndelag Health Study (HUNT), deCODE, the Michigan Genomics Initiative (MGI), DiscovEHR, UK Biobank, and the AF HRC Consortium in this study . This study, including 60,620 patients with AF (mainly diagnosed according to ICD‐9 or ICD‐10) and 970,216 controls of European ancestry, reported 111 independent genetic loci (r2 < 0.10) reaching genome-wide significance (P < 5 × 10–8) . We utilized the reported single nucleotide polymorphisms (SNPs) as IVs for OSA and AF in the present study, and extracted the SNP-outcome associations from the summary statistics for outcomes (Additional file 1: Table S1-2). Those SNPs not available in the outcome datasets were replaced by proxy SNPs (r2 > 0.8) by searching an online website (http://snipa.helmholtz-muenchen.de/snipa3/).
We used the fixed-effects inverse-variance weighted (IVW) model as the main statistical method. Several sensitivity analyses, including the weighted median , MR-Egger , MR-robust adjusted profile score (MR-RAPS) , and the MR-pleiotropy residual sum and outlier (MR-PRESSO) , were applied to examine the robustness of the results and possible pleiotropy. The weighted median method assumed that more than 50% of the weight was derived from valid SNPs and could provide consistent estimates on causal effects . The MR-Egger approach provided estimates after correcting for pleiotropic effects, although at the cost of lower statistical power . The MR-RAPS corrected for horizontal pleiotropy in the IVW analysis by using robust adjusted profile scores . The MR-PRESSO method detected and corrected for outliers, providing MR estimates robust to heterogeneity after removing the identified outliers . As pleiotropy in the MR analyses can lead to confounding and bias of MR estimates, investigation of pleiotropy is of importance. We undertook multiple methods to identify potential pleiotropy. First, Cochran's Q statistic was used to assess the heterogeneity among IVs. A Cochran's Q-derived P < 0.05 was deemed as a marker of heterogeneity, and in that case, the multiplicative random-effects IVW method would be implemented. Second, the intercept test from the MR-Egger method was conducted to measure for pleiotropy . Third, we performed the leave-one-out analysis to evaluate the consistency of associations and identify whether the results were driven by any individual SNP. Last, we searched each IV in the PhenoScanner database (version 2.0) to evaluate if there were any previous significant associations (P < 5 × 10–8) with confounders, including body mass index (BMI), weight, blood pressure, and glycemic and lipid traits (Additional file 1: Table S3). We further performed the MR analyses by ruling out potential pleiotropic SNPs.
Replication analyses were performed to validate the reliability of our results by using another GWAS for AF from the AF HRC consortium (Atrial Fibrillation Haplotype Reference Consortium) as the outcome dataset, which consists of 65,446 AF cases and 522,744 controls (Table 1) . Additional analyses were further implemented to evaluate the robustness of the significant causal effect of OSA on AF through estimating the causality of OSA-related phenotype (snoring) with AF. IVs for snoring were obtained from a recent GWAS published by Campos et al. by using UK biobank data (152,302 cases and 256,015 control) (Table 1) . This study identified 41 genome-wide significant loci, and all these 41 SNPs were in different genomic regions and were not in linkage disequilibrium (r2 < 0.10) . The reported SNPs were used to determine snoring-associated IVs. After excluding 10 non-biallelic SNPs and 1 SNP genome-wide significantly associated with AF in the AF GWAS from Nielsen et al. (rs4744369, P = 1.83 × 10–27), 30 SNPs remained as IVs (Additional file 1: Table S4).
Previous studies have shown that OSA is strongly correlated with cardiovascular and metabolic traits . Besides, associations between rs9937053 and BMI, type 2 diabetes mellitus (T2D), and hypertension (HTN) were found in the PhenoScanner database. Therefore, we performed regression-based multivariable MR to obtain direct effects of OSA on AF that were independent of potential confounders (BMI, blood pressure, T2D, and circulating lipid levels). We extracted the genetic associations of instruments with those confounders from publicly available GWASs, including BMI , blood pressure measurements [HTN, systolic blood pressure (SBP), and diastolic blood pressure (DBP)] , T2D , and circulating lipid levels [low-density lipoprotein cholesterol (LDL-C), high-density lipoprotein cholesterol (HDL-C), and triglycerides (TG)] , respectively. Detailed information for each GWAS was displayed in Table 1.
The reported odds ratios (ORs) and corresponding 95% confidence intervals (CIs) were interpreted per one-unit increase of log odds of exposure traits (OSA, AF, and snoring). Associations with P-values < 0.05 were considered to indicate statistical significance. All analyses were conducted in R foundation (Version 4.0.2) by using package TwosampleMR , MR-PRESSO , and MendelianRandomization .
Genetic liability to OSA with AF
In the fixed-effects IVW analysis, genetic liability to OSA was associated with a higher risk of AF using the outcome dataset from Nielsen et al. (OR 1.210; 95% CI 1.119–1.307; P = 1.51 × 10–6) (Fig. 2, Additional file 1: Table S5). There was no presence of heterogeneity estimated by Cochran's Q statistics (P = 0.245; Additional file 1: Table S5) or pleiotropy detected by MR-Egger intercept and MR-PRESSO method (Pintercept = 0.272, PMR-PRESSO global test = 0.240; Additional file 1: Table S5). Sensitivity analyses, including the weighted median, MR-Egger, and MR-RAPS, yielded robust and consistent results (Fig. 2, Additional file 1: Table S5). Removal of the pleiotropic genetic variant (rs9937053) identified in the PhenoScanner database did not change the significant result (Fig. 2, Additional file 1: Table S5). Furthermore, the significant result was not driven by any single SNP according to the leave-one-out analysis (Additional file 1: Figure S1).
When performing replication analyses using another AF GAWS from AF HRC, the causal association between OSA with AF remained stable and robust except for the MR-Egger approach which had broader CIs (Fig. 2, Additional file 1: Table S5). To further validate the reliability of our results, we used the OSA-related phenotype (snoring) as the exposure. A significant causal association between snoring and AF was observed across all MR methods except for the weighted median and MR-Egger methods, although increased ORs were observed (Additional file 1: Figure S2, Additional file 1: Table S5).
To obtain the direct causal effect of OSA on AF, we used the regression-based multivariable MR approach to correct for potential confounders (BMI, blood pressure, T2D, circulating lipid levels, and snoring). After adjusting for every single confounder, OSA remained to be associated with an increased risk of AF (Table 2).
Genetic liability to AF with OSA
Reverse MR analyses did not obtain a causal association between genetic liability to AF with OSA using the fixed-effects IVW method (OR 1.022; 95% CI 0.981–1.066; P = 0.294; Fig. 3, Additional file 1: Table S5). The lack of association remained in the weighted median method, MR-Egger method, and MR-RAPS analysis (Fig. 3, Additional file 1: Table S5). There was evidence of heterogeneity and horizontal pleiotropy (P for Cochran's Q statistics = 0.019, PMR-PRESSO global test = 0.023; Additional file 1: Table S5); nevertheless, no directional pleiotropy or outlier was identified (Pintercept = 0.399; Additional file 1: Table S5). Thus, we moved from the fixed-effects IVW method to the random-effects IVW model, and similarly, there was also no causal association between genetically predicted AF and OSA. The leave-one-out analysis demonstrated that no heterogeneous SNPs largely affected the causal estimates (Additional file 1: Figure S3). Moreover, analyses excluding the 14 pleiotropic SNPs did not change the results (Fig. 3, Additional file 1: Table S5).
This two-sample bidirectional MR study demonstrated that genetic predisposition to OSA was causally associated with an increased risk of AF. On the other hand, there was no evidence supporting a causal association of AF with the risk of OSA.
Previous observational studies have concluded that OSA is a possible independent risk factor for AF. For instance, a large sleep-clinic cohort showed that, after adjusting for multivariate predictors of AF, including age, BMI, diabetes, etc., OSA diagnosis was independently predictive of AF [hazard ratio (HR) 1.55; 95% CI 1.21–2.00; P < 0.001] . This study further reported a dose–response correlation between the severity of OSA and the risk of AF, with mild, moderate, and severe OSA associated with 1.48-fold, 1.51-fold, and 1.73-fold higher risk of incident AF, respectively. Another clinic-based study also indicated that OSA was a strong predictor of incident AF (HR 2.18; 95% CI 1.34–3.54; P = 0.002), as well as multiple measures of OSA severity . Likewise, in a large arrhythmia-free clinical cohort of 8,256 subjects with suspected OSA, severe nocturnal hypoxemia was found to be independently associated with an increased risk of incident hospitalized AF . However, in a community-based prospective study, Tung et al. found no association between obstructive apnea‐hypopnea index and incident AF . The divergent findings of previous studies might be due to variability in the OSA diagnosis criteria, sample size, and study population. In addition, these observational studies could be limited by selection bias, short follow-up duration, as well as unmeasured confounding factors. Applying a two-sample MR approach, our study provided causal evidence that OSA was a risk factor for AF, which was in line with most previous studies and less susceptible to confounding factors and reverse causation.
Recently, Chen et al. used the MR method to evaluate the causal effect of OSA on AF and found that genetically predicted OSA was associated with an increased risk of AF in both the fixed‐effects and random‐effects IVW models, and the results were robust in sensitivity analyses . Consistently, a significant causal association between OSA and AF was observed in our MR study. However, our study did further investigations to make our results more creditable. First, we applied bidirectional MR design, which additionally found no causal effect of AF on OSA. Second, we replicated the detrimental effect of OSA on AF in another AF data source. In addition, we estimated the causality of OSA-related phenotype (snoring) with AF, and the results also revealed a causal association. Last, we further obtained the direct effect of OSA on AF with a multivariable MR approach, considering OSA is strongly correlated with cardiovascular and metabolic traits. After accounting for each risk factor, the causal effect of OSA on AF risk remained.
Multiple pathophysiological mechanisms might mediate the causal association of OSA with AF risk. Abnormalities of gas exchange in OSA patients, characterized as intermittent hypoxia and hypercapnia, might impact the AF substrate [26, 27]. Moreover, repetitive hypoxia and reoxygenation could lead to oxidative stress and systemic inflammation, which have already been implicated in AF . Sympathetic and parasympathetic imbalances due to OSA also seem to play an essential role in AF pathogenesis . In addition, significant atrial structural and electrical remodeling forming the substrate predisposing to AF was observed in OSA patients, including atrial enlargement, voltage reduction, and conduction abnormalities [31, 32].
As the present MR study indicated that OSA exerted a detrimental impact on AF, early screening and appropriate management of OSA might become an essential issue. It was reported that continuous positive airway pressure (CPAP) therapy in OSA patients significantly prevented the occurrence of paroxysmal AF (P < 0.001) . In addition, several meta-analyses concluded that treating OSA with CPAP could improve the effectiveness of AF interventions, reduce the risk of AF recurrence, improve the atrial conduction, and prevent the atrial remodeling [34,35,36], which further supported the importance of identifying and managing OSA in AF patients.
Prior studies found that the prevalence of OSA in AF patients was much higher than in the general population ; however, prospective randomized trials are rare regarding the effect of AF on OSA. Several small-scale studies have shown controversial results of whether restoration of sinus rhythm from AF could reduce the burden of OSA. Naruse et al. reported a reduction in OSA among 25 AF patients after radiofrequency catheter ablation , and similarly, Fox et al. found that restoration of sinus rhythm of patients with AF or atrial flutter substantially decreased apnea–hypopnea index (from 23.4 ± 16.3 to 16.3 ± 11.5/h, P < 0.001) . Whereas, multiple studies suggested that restoring the atrial function of AF patients did not affect the prevalence and severity of OSA [39,40,41], eliminating that AF did not play a causative or aggravating role in OSA. Considering the small sample size and short follow-up periods of the existing studies, it is hard to conclude whether AF could affect the risk of OSA. In this MR study, no causality of genetically predicted AF with the risk of OSA was observed, which further supported the evidence that OSA is a risk factor for AF, but not the opposite.
This bidirectional MR study used the latest datasets available for the exposures and outcomes to comprehensively investigate the causal inference between OSA and AF, avoiding possible confounders and reverse causation of traditional observational studies. In addition, a range of sensitivity analyses, replication analyses, and multivariable MR analyses were applied, to test the robustness and reliability of our results. It turned out that the causal estimates in this study were robust and reliable. However, some limitations exist in this study. First, the participants of the datasets involved in our study were mainly from the European-ancestry, which limited the generalization of our results to other populations. Second, although there was no sample overlap between the FinnGen study and two AF datasets, the GWAS for snoring was from the UK Biobank, leading to a small sample overlap with the AF dataset, which might cause minor bias in MR estimates. Third, potential pleiotropy would violate three MR assumptions, which in turn biased our results. Nonetheless, several approaches were performed to minimize the probability of pleiotropy bias, including identifying pleiotropy with MR-Egger intercept analysis, detecting outliers by the MR-PRESSO method, and searching pleiotropic IVs in the PhenoScanner database. Last, we were unable to assess the sexual effects on the associations between OSA and AF because of lacking sex-specific data.
In conclusion, our MR study suggested that genetic liability to OSA was causally associated with an increased risk of AF. On the other hand, no causal effect of AF on OSA risk was observed. Considering the immense disease burden and the causal link obtained in this study, early screening and appropriate management of OSA might show anti-arrhythmic benefits.
Availability of data and materials
Our study used publicly available summary-level data of GWAS. The summary statistics for obstructive sleep apnea are available for download under the phenocode G6_SLEEPAPNO at https://www.finngen.fi/en. The meta-analysis summary association statistics for atrial fibrillation from Nielsen et al. are available through http://csg.sph.umich.edu/willer/public/afib2018. The summary statistics of GWAS for atrial fibrillation from AF HRC are derived from the Cardiovascular Disease Knowledge Portal (http://www.broadcvdi.org/). Full GWAS summary statistics for snoring and body mass index are publicly available through the NHGRI-EBI GWAS Catalogue (https://www.ebi.ac.uk/gwas/downloads/summary-statistics). Summary level data for blood pressure measurements can be accessed at http://www.nealelab.is/uk-biobank/. The data for type 2 diabetes is available at the DIAGRAM consortium website http://diagram-consortium.org/. And summary statistics for circulating lipid levels are available from https://gwas.mrcieu.ac.uk. The code used for this study is openly available on GitHub (https://github.com/Cl-sunny/Mendelian-randomization-OSA-AF.git).
Obstructive sleep apnea
Genome-wide association study
International Classification of Diseases
Single nucleotide polymorphisms
MR-robust adjusted profile score
MR-pleiotropy residual sum and outlier
Body mass index
- AF HRC:
Atrial Fibrillation Haplotype Reference Consortium
Type 2 diabetes mellitus
Systolic blood pressure
Diastolic blood pressure
Low-density lipoprotein cholesterol
High-density lipoprotein cholesterol
Continuous positive airway pressure
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The authors want to acknowledge all the participants and investigators of the GWASs involved in the present study for generously sharing the summary-level data.
This study was funded by the National Natural Science Foundation of China (Nos. 81873484), the National Natural Science Foundation of China Youth Project (Nos. 82000316).
Ethics approval and consent to participate
Not applicable. We used summary-level data from publicly available GWAS studies which have received ethical approval from their respective institutional review boards and informed consent from all participants. No administrative permissions were required to access the data.
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The author reports no conflicts of interest in this work.
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Table S1. Characteristics of the genetic variants used for Mendelian randomization analysis of obstructive sleep apnea on atrial fibrillation. Table S2. Characteristics of the genetic variants used for Mendelian randomization analysis of atrial fibrillation on obstructive sleep apnea. Table S3. Characteristics of the SNPs significantly associated with potential confounders (P < 5×10-8). Table S4. Characteristics of the genetic variants used for Mendelian randomization analysis of snoring on atrial fibrillation. Table S5. Results of causal inference between obstructive sleep apnea and atrial fibrillation. Figure S1. Leave-one-out analysis for causal effect of obstructive sleep apnea on atrial fibrillation. Figure S2. Additional Mendelian randomization analyses of the associations of snoring with atrial fibrillation. Figure S3. Leave-one-out analysis for causal effect of atrial fibrillation on obstructive sleep apnea.
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Chen, L., Sun, X., He, Y. et al. Obstructive sleep apnea and atrial fibrillation: insights from a bidirectional Mendelian randomization study. BMC Med Genomics 15, 28 (2022). https://doi.org/10.1186/s12920-022-01180-5